Preprocessing

Tutorials for spatial transcriptomics data preprocessing.

• Crop and Rotation of spatial transcriptomic data
• Cell Segmentation (10x HD)
• Analyze NanoString data
• Analyze Xenium data
• Analyze 10x Atera (WTA Preview) FFPE breast cancer data
• Analyze Visium HD data
• Spatial integration and clustering
• Preprocess data
• Training STAligner model
• Clustering the space